234 lines
12 KiB
PHP
Executable File
234 lines
12 KiB
PHP
Executable File
<?php
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namespace App\Database\Seeds;
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use CodeIgniter\Database\Seeder;
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class CmodQcSeeder extends Seeder
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{
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public function run()
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{
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$this->seedDepts();
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$this->seedControls();
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$this->seedTests();
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$this->seedControlTests();
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$this->seedResults();
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$this->seedTestComments();
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}
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protected function seedDepts()
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{
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$depts = [
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['dept_name' => 'Chemistry'],
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['dept_name' => 'Hematology'],
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['dept_name' => 'Immunology'],
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['dept_name' => 'Urinalysis'],
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];
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$this->db->table('master_depts')->insertBatch($depts);
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}
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protected function seedControls()
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{
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$controls = [
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['dept_id' => 1, 'control_name' => 'QC Normal Chemistry', 'lot' => 'QC2024001', 'producer' => 'BioRad', 'exp_date' => '2025-12-31'],
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['dept_id' => 1, 'control_name' => 'QC High Chemistry', 'lot' => 'QC2024002', 'producer' => 'BioRad', 'exp_date' => '2025-12-31'],
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['dept_id' => 2, 'control_name' => 'QC Normal Hema', 'lot' => 'QC2024003', 'producer' => 'Streck', 'exp_date' => '2025-11-30'],
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['dept_id' => 2, 'control_name' => 'QC Low Hema', 'lot' => 'QC2024004', 'producer' => 'Streck', 'exp_date' => '2025-11-30'],
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['dept_id' => 3, 'control_name' => 'QC Normal Immuno', 'lot' => 'QC2024005', 'producer' => 'Roche', 'exp_date' => '2025-10-31'],
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['dept_id' => 4, 'control_name' => 'QC Normal Urine', 'lot' => 'QC2024006', 'producer' => 'Siemens', 'exp_date' => '2025-09-30'],
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// January 2026 controls
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['dept_id' => 1, 'control_name' => 'Trulab N', 'lot' => 'TN2026001', 'producer' => 'Trinity', 'exp_date' => '2026-12-31'],
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['dept_id' => 1, 'control_name' => 'Trulab P', 'lot' => 'TP2026001', 'producer' => 'Trinity', 'exp_date' => '2026-12-31'],
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['dept_id' => 1, 'control_name' => 'Cholestest', 'lot' => 'CT2026001', 'producer' => 'Roche', 'exp_date' => '2026-12-31'],
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// February 2026 controls (new lots)
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['dept_id' => 2, 'control_name' => 'QC Normal Hema', 'lot' => 'H202602', 'producer' => 'Streck', 'exp_date' => '2026-12-31'],
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['dept_id' => 2, 'control_name' => 'QC Low Hema', 'lot' => 'HL202602', 'producer' => 'Streck', 'exp_date' => '2026-12-31'],
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['dept_id' => 1, 'control_name' => 'Trulab N', 'lot' => 'TN202602', 'producer' => 'Trinity', 'exp_date' => '2026-12-31'],
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];
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$this->db->table('master_controls')->insertBatch($controls);
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}
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protected function seedTests()
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{
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$tests = [
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['dept_id' => 1, 'test_code' => 'GLU', 'test_name' => 'Glucose', 'test_unit' => 'mg/dL', 'test_method' => 'GOD-PAP', 'cva' => 5, 'ba' => 3, 'tea' => 10],
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['dept_id' => 1, 'test_code' => 'CRE', 'test_name' => 'Creatinine', 'test_unit' => 'mg/dL', 'test_method' => 'Jaffe', 'cva' => 4, 'ba' => 2, 'tea' => 8],
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['dept_id' => 1, 'test_code' => 'BUN', 'test_name' => 'Urea Nitrogen', 'test_unit' => 'mg/dL', 'test_method' => 'UREASE', 'cva' => 5, 'ba' => 3, 'tea' => 12],
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['dept_id' => 1, 'test_code' => 'CHOL', 'test_name' => 'Cholesterol', 'test_unit' => 'mg/dL', 'test_method' => 'CHOD-PAP', 'cva' => 6, 'ba' => 4, 'tea' => 15],
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['dept_id' => 2, 'test_code' => 'WBC', 'test_name' => 'WBC', 'test_unit' => 'x10^3/uL', 'test_method' => 'Impedance', 'cva' => 8, 'ba' => 5, 'tea' => 20],
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['dept_id' => 2, 'test_code' => 'RBC', 'test_name' => 'RBC', 'test_unit' => 'x10^6/uL', 'test_method' => 'Impedance', 'cva' => 3, 'ba' => 2, 'tea' => 8],
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['dept_id' => 2, 'test_code' => 'HGB', 'test_name' => 'Hemoglobin', 'test_unit' => 'g/dL', 'test_method' => 'Cyanmethemoglobin', 'cva' => 2, 'ba' => 1, 'tea' => 5],
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['dept_id' => 3, 'test_code' => 'TSH', 'test_name' => 'TSH', 'test_unit' => 'mIU/L', 'test_method' => 'ECLIA', 'cva' => 10, 'ba' => 6, 'tea' => 25],
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['dept_id' => 3, 'test_code' => 'FT4', 'test_name' => 'Free T4', 'test_unit' => 'ng/dL', 'test_method' => 'ECLIA', 'cva' => 8, 'ba' => 5, 'tea' => 20],
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['dept_id' => 4, 'test_code' => 'UP', 'test_name' => 'Urine Protein', 'test_unit' => 'mg/dL', 'test_method' => 'Dipstick', 'cva' => 10, 'ba' => 8, 'tea' => 30],
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];
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$this->db->table('master_tests')->insertBatch($tests);
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}
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protected function seedControlTests()
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{
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$controlTests = [
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['control_id' => 1, 'test_id' => 1, 'mean' => 95, 'sd' => 5],
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['control_id' => 1, 'test_id' => 2, 'mean' => 1.0, 'sd' => 0.05],
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['control_id' => 1, 'test_id' => 3, 'mean' => 15, 'sd' => 1.2],
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['control_id' => 2, 'test_id' => 1, 'mean' => 180, 'sd' => 12],
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['control_id' => 2, 'test_id' => 2, 'mean' => 2.5, 'sd' => 0.15],
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['control_id' => 2, 'test_id' => 4, 'mean' => 200, 'sd' => 15],
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['control_id' => 3, 'test_id' => 5, 'mean' => 7.5, 'sd' => 0.6],
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['control_id' => 3, 'test_id' => 6, 'mean' => 4.8, 'sd' => 0.2],
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['control_id' => 3, 'test_id' => 7, 'mean' => 14.5, 'sd' => 0.5],
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['control_id' => 4, 'test_id' => 5, 'mean' => 3.5, 'sd' => 0.3],
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['control_id' => 4, 'test_id' => 6, 'mean' => 2.5, 'sd' => 0.15],
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['control_id' => 5, 'test_id' => 8, 'mean' => 2.5, 'sd' => 0.3],
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['control_id' => 5, 'test_id' => 9, 'mean' => 1.2, 'sd' => 0.1],
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['control_id' => 6, 'test_id' => 10, 'mean' => 10, 'sd' => 1.5],
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['control_id' => 1, 'test_id' => 4, 'mean' => 150, 'sd' => 10],
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// New control-tests for January 2026
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['control_id' => 7, 'test_id' => 1, 'mean' => 90, 'sd' => 4], // Trulab N - Glucose
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['control_id' => 7, 'test_id' => 2, 'mean' => 0.9, 'sd' => 0.04], // Trulab N - Creatinine
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['control_id' => 7, 'test_id' => 4, 'mean' => 145, 'sd' => 8], // Trulab N - Cholesterol
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['control_id' => 8, 'test_id' => 1, 'mean' => 175, 'sd' => 10], // Trulab P - Glucose
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['control_id' => 8, 'test_id' => 2, 'mean' => 2.4, 'sd' => 0.12], // Trulab P - Creatinine
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['control_id' => 8, 'test_id' => 4, 'mean' => 195, 'sd' => 12], // Trulab P - Cholesterol
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['control_id' => 9, 'test_id' => 4, 'mean' => 180, 'sd' => 10], // Cholestest - Cholesterol
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// February 2026 control-tests
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['control_id' => 10, 'test_id' => 5, 'mean' => 7.6, 'sd' => 0.5], // QC Normal Hema (Feb) - WBC
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['control_id' => 10, 'test_id' => 6, 'mean' => 4.7, 'sd' => 0.2], // QC Normal Hema (Feb) - RBC
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['control_id' => 10, 'test_id' => 7, 'mean' => 14.8, 'sd' => 0.4], // QC Normal Hema (Feb) - HGB
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['control_id' => 11, 'test_id' => 5, 'mean' => 3.4, 'sd' => 0.25], // QC Low Hema (Feb) - WBC
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['control_id' => 11, 'test_id' => 6, 'mean' => 2.4, 'sd' => 0.14], // QC Low Hema (Feb) - RBC
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['control_id' => 12, 'test_id' => 1, 'mean' => 92, 'sd' => 4.2], // Trulab N (Feb) - Glucose
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['control_id' => 12, 'test_id' => 2, 'mean' => 0.95, 'sd' => 0.05], // Trulab N (Feb) - Creatinine
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['control_id' => 12, 'test_id' => 4, 'mean' => 148, 'sd' => 9], // Trulab N (Feb) - Cholesterol
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];
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$this->db->table('control_tests')->insertBatch($controlTests);
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}
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protected function seedResults()
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{
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$faker = \Faker\Factory::create();
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$results = [];
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$controlTests = $this->db->table('control_tests')->get()->getResultArray();
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$resultCount = 0;
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$maxResults = 150; // Increased for more test data
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// January 2026 results (days 1-31)
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foreach ($controlTests as $ct) {
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$numResults = $faker->numberBetween(3, 5);
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for ($i = 0; $i < $numResults && $resultCount < $maxResults; $i++) {
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$day = $faker->numberBetween(1, 31);
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$resDate = "2026-01-" . str_pad($day, 2, '0', STR_PAD_LEFT);
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$value = $ct['mean'] + ($faker->randomFloat(2, -2.5, 2.5) * $ct['sd']);
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$results[] = [
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'control_id' => $ct['control_id'],
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'test_id' => $ct['test_id'],
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'res_date' => $resDate,
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'res_value' => round($value, 2),
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'created_at' => date('Y-m-d H:i:s'),
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'updated_at' => date('Y-m-d H:i:s'),
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];
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$resultCount++;
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}
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}
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// February 2026 results (days 1-28)
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foreach ($controlTests as $ct) {
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$numResults = $faker->numberBetween(3, 5);
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for ($i = 0; $i < $numResults && $resultCount < $maxResults; $i++) {
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$day = $faker->numberBetween(1, 28);
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$resDate = "2026-02-" . str_pad($day, 2, '0', STR_PAD_LEFT);
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$value = $ct['mean'] + ($faker->randomFloat(2, -2.5, 2.5) * $ct['sd']);
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$results[] = [
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'control_id' => $ct['control_id'],
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'test_id' => $ct['test_id'],
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'res_date' => $resDate,
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'res_value' => round($value, 2),
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'created_at' => date('Y-m-d H:i:s'),
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'updated_at' => date('Y-m-d H:i:s'),
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];
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$resultCount++;
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}
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}
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$this->db->table('results')->insertBatch($results);
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}
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protected function seedTestComments()
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{
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$faker = \Faker\Factory::create();
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$comments = [];
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// Get all tests
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$tests = $this->db->table('master_tests')->get()->getResultArray();
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// Comment templates for different test types
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$commentTemplates = [
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'QC stable throughout the period',
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'Slight drift observed, monitoring continued',
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'Calibration verified, values within range',
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'Reagent lot changed, new QC run initiated',
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'Instrument maintenance performed',
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'Shift detected, corrective action taken',
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'Control values consistent with previous lot',
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'Temperature check completed, within specs',
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'New lot validated successfully',
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'Periodic check satisfactory',
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];
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// Generate comments for Jan 2026 (days 1-31)
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foreach ($tests as $test) {
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$numComments = $faker->numberBetween(3, 6);
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$usedDates = [];
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for ($i = 0; $i < $numComments; $i++) {
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// Pick a random date in January
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do {
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$day = $faker->numberBetween(1, 31);
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$dateKey = "2026-01-" . str_pad($day, 2, '0', STR_PAD_LEFT);
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} while (in_array($dateKey, $usedDates));
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$usedDates[] = $dateKey;
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$comments[] = [
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'test_id' => $test['test_id'],
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'comment_date' => $dateKey,
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'comment_text' => $faker->randomElement($commentTemplates),
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'created_at' => date('Y-m-d H:i:s'),
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'updated_at' => date('Y-m-d H:i:s'),
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];
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}
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}
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// Generate comments for Feb 2026 (days 1-28)
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foreach ($tests as $test) {
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$numComments = $faker->numberBetween(2, 5);
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$usedDates = [];
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for ($i = 0; $i < $numComments; $i++) {
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// Pick a random date in February
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do {
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$day = $faker->numberBetween(1, 28);
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$dateKey = "2026-02-" . str_pad($day, 2, '0', STR_PAD_LEFT);
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} while (in_array($dateKey, $usedDates));
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$usedDates[] = $dateKey;
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$comments[] = [
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'test_id' => $test['test_id'],
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'comment_date' => $dateKey,
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'comment_text' => $faker->randomElement($commentTemplates) . ' (Feb)',
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'created_at' => date('Y-m-d H:i:s'),
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'updated_at' => date('Y-m-d H:i:s'),
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];
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}
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}
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$this->db->table('test_comments')->insertBatch($comments);
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}
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}
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