mahdahar
40ecb4e6e8
This commit marks a significant architectural shift, transitioning the CLQMS backend to a fully headless REST API. All view-related components have been removed to focus solely on providing a robust, stateless API for clinical laboratory workflows.
### Architectural Changes
- **Headless API Transition:**
- Removed all view files (`app/Views/v2`), associated page controllers (`PagesController`), and routes (`Routes.php`). The application no longer serves a front-end UI.
- The root endpoint (`/`) now returns a simple "Backend Running" status message.
- **Developer Tooling & Guidance:**
- Replaced `CLAUDE.md` with `GEMINI.md` to provide updated context and instructional guidelines for Gemini agents.
- Updated `.serena/project.yml` with project configuration.
### Feature Enhancements
- **Advanced Order Management (`OrderTestModel`):**
- **Test Expansion:** The `createOrder` process now automatically expands `GROUP` (panel) tests into their individual components and recursively includes all parameter dependencies for `CALC` (calculated) tests.
- **Order Comments:** Added support for attaching comments to an order via the `ordercom` table.
- **Status Tracking:** Order status updates are now correctly recorded in the `orderstatus` table.
- **Schema Alignment:** Switched from `OrderID` to `InternalOID` as the primary key for internal operations.
- **Reference Range Refactor (`TestsController`):**
- Simplified reference range logic by consolidating `refthold` and `refvset` into the main `refnum` and `reftxt` tables.
- Standardized `RefType` handling to support `NMRC`, `TEXT`, `THOLD`, and `VSET` codes from the `reference_type` ValueSet.
### Other Changes
- **Documentation:**
- `PRD.md`, `README.md`, and `TODO.md` were updated to reflect the headless architecture, refined scope, and current project priorities.
- **Database:**
- Removed obsolete `RefTHoldID` and `RefVSetID` columns from the `patres` table migration.
- **Testing:**
- Added new feature tests for `ContactController`, `OrganizationController`, and `TestsController`.
119 lines
3.6 KiB
PHP
119 lines
3.6 KiB
PHP
<?php
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namespace Tests\Feature;
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use CodeIgniter\Test\FeatureTestTrait;
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use CodeIgniter\Test\CIUnitTestCase;
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use Firebase\JWT\JWT;
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class TestsControllerTest extends CIUnitTestCase
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{
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use FeatureTestTrait;
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protected $token;
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protected function setUp(): void
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{
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parent::setUp();
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// Generate JWT Token
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$key = getenv('JWT_SECRET') ?: 'my-secret-key';
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$payload = [
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'iss' => 'localhost',
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'aud' => 'localhost',
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'iat' => time(),
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'nbf' => time(),
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'exp' => time() + 3600,
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'uid' => 1,
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'email' => 'admin@admin.com'
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];
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$this->token = JWT::encode($payload, $key, 'HS256');
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}
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protected function callProtected($method, $path, $params = [])
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{
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return $this->withHeaders(['Cookie' => 'token=' . $this->token])
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->call($method, $path, $params);
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}
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public function testIndexReturnsSuccess()
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{
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$result = $this->callProtected('get', 'api/tests');
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$result->assertStatus(200);
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$json = $result->getJSON();
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$data = json_decode($json, true);
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$this->assertEquals('success', $data['status']);
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$this->assertIsArray($data['data']);
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}
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public function testShowReturnsDataIfFound()
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{
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// First get an ID
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$indexResult = $this->callProtected('get', 'api/tests');
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$indexData = json_decode($indexResult->getJSON(), true);
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if (empty($indexData['data'])) {
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$this->markTestSkipped('No test definitions found in database to test show.');
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}
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$id = $indexData['data'][0]['TestSiteID'];
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$result = $this->callProtected('get', "api/tests/$id");
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$result->assertStatus(200);
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$json = $result->getJSON();
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$data = json_decode($json, true);
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$this->assertEquals('success', $data['status']);
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$this->assertIsArray($data['data']);
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$this->assertEquals($id, $data['data']['TestSiteID']);
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}
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public function testCreateTestWithThreshold()
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{
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$testData = [
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'TestSiteCode' => 'TH' . substr(time(), -4),
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'TestSiteName' => 'Threshold Test ' . time(),
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'TestType' => 'TEST',
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'SiteID' => 1,
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'details' => [
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'RefType' => 'THOLD',
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'ResultType' => 'NMRIC'
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],
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'refnum' => [
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[
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'NumRefType' => 'THOLD',
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'RangeType' => 'VALUE',
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'Sex' => '1',
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'AgeStart' => 0,
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'AgeEnd' => 100,
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'LowSign' => '>',
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'Low' => 5.5,
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'Interpretation' => 'High'
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]
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]
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];
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$result = $this->withHeaders(['Cookie' => 'token=' . $this->token])
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->withBody(json_encode($testData))
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->call('post', 'api/tests');
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$result->assertStatus(201);
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$json = $result->getJSON();
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$data = json_decode($json, true);
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$this->assertEquals('created', $data['status']);
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$id = $data['data']['TestSiteId'];
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// Verify retrieval
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$showResult = $this->callProtected('get', "api/tests/$id");
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$showData = json_decode($showResult->getJSON(), true);
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$this->assertArrayHasKey('refnum', $showData['data']);
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$this->assertCount(1, $showData['data']['refnum']);
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$this->assertEquals(5.5, $showData['data']['refnum'][0]['Low']);
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$this->assertEquals('High', $showData['data']['refnum'][0]['Interpretation']);
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}
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}
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